CDS

Accession Number TCMCG006C119544
gbkey CDS
Protein Id XP_013643812.1
Location join(26299872..26300054,26300142..26300214,26300289..26300513,26300603..26300649,26300755..26300853,26300982..26301056,26301169..26301257,26301471..26301611,26301698..26301768,26301854..26301933,26302040..26302189,26302523..26302582,26302692..26302766,26302996..26303147,26303247..26303382,26303459..26303590,26303709..26303786,26303870..26303925,26304009..26304089,26304179..26304335,26304417..26304518,26304610..26304659,26304843..26304912)
Gene LOC106348594
GeneID 106348594
Organism Brassica napus

Protein

Length 793aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013788358.2
Definition chloride channel protein CLC-d isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category P
Description Chloride channel protein
KEGG_TC 2.A.49.3.3
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05016        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCACTCGAATCATCTACAGAACGGGATCGAATCCGATAATCTCCTCTGGTCTCGCGTCCCTGACTCCGACGATGCTTCCACCGACGGCGTTGGCTTACTCAGCTCCCCCCGTGACGGCGGCGGTGGCGTTGATAGTCTTGATTACGAGGTTATCGAGAATTACGCTTACAGAGAAGAACAGGCGCATAGAGGGAAGCTTTACGTTGGTTACTACGTTGCAGTCAAGTGGTTCTTCTCGTTACTCATCGGGATCGGAACTGGATTGGCTGCTGTTTTCATTAATCTCTCGGTTGAGAATTTCGCTGGATGGAAGTTTGCTCTGACTTTCGCCATCATTCAGAAGTCTTATTTTGCGGGGTTTATTGTTTACCTTGTCATCAATCTAGTCTTGGTGTTTTCTTCCGCGTATATTATTACGCAGTTTGCTCCTGCTGCCGCTGGCTCTGGCATTCCACCTGAGATCAAGGGTTATCTCAACGGAATTGATATTCCTGGTACCTTGCTCTTTAGAACCCTTATCGGAAAGATATTTGGAAGCATTGGTTCTGTTGGAGGTGGTTTAGCCTTGGGGAAAGAAGGCCCACTTGTACATACAGGTGCTTGCATTGCATCTTTGCTTGGTCAGGGTGGATCTACCAAATACCATTTTAACTCTAGATGGCCGCAGCTTTTTAAGAGTGACAGAGATCGTCGTGATCTTGTCACTTGTGGATGTGCAGCTGGAGTTGCTGCAGCTTTTAGAGCTCCAGTTGGTGGAGTGTTATTTGCGTTAGAGGAGGTCACATCATGGTGGAGAAGTCAACTTATGTGGCGTGTCTTTTTCACATCTGCTATCGTGGCTGTTGTGGTGCGTACTGCCATGGGATGGTGCAAGAGTGGAATATGTGGACATTTTGGTGGAGGTGGTTTCATTATATGGGATGTTTCAGATGGTCAAGATGACTACTACTTCAAGGAGCTACTACCAATGGCTGTAATTGGAGTTATCGGAGGCCTACTTGGGGCATTATTCAACCAACTTACATACTATATGACATCATGGCGTCGAAATTATTTGCACAAGAAAGGAAATCGAGTGAAGATATATGAAGCATGCATCATCTCTTGCTTAACTTCAGCAATCTCATTTGGGCTGCCACTCCTAAGGAAATGCAGTCCATGCCCTGAAACAGTTACTGACTCTGGTATTGAATGTCCACGGCCTCCTGGAATGTATGGGAATTACGTAAATTTCTACTGCAAGACGGATAACGAATACAATGATCTCGCCACAATTTTCTTCAATACTCAGGATGATGCGATAAGGAATTTGTTCAGCGCAAAAACAATGCGAGAATTCAGTGCTCAGAGTCTACTGACTTTTTTGGCTATGTTTTATACGTTAGCAGTGGTGACATTTGGCACAGCTGTTCCCGCTGGCCAGTTTGTCCCTGGAATAATGATAGGATCAACTTATGGGCGCCTTGTAGGCATGTTTGTAGTCAGGTTTTACAAGAAGCTCAACATTGAAGAGGGAACTTATGCTTTGCTGGGAGCTGCTTCATTTCTTGGAGGCTCGATGCGGATGACTGTATCTTTATGTGTTATCATGGTTGAAATCACAAACAACCTGAAACTTCTGCCTCTTATAATGTTGGTTCTTCTCGTTTCAAAGGCCGTGGGTGATGCTTTCAATGAGGGATTGTATGAAGTACAAGCACGCCTTAAGGGCATTCCGTTACTGGAATCGAGACCCAAATATCACATGCGGCAAATGATAGCGAAGGAAGCATGTCAAAGTCAGAAGGTAATTTCTTTACCTCGAGTTATCAGAGTTGCAGATGTCGCTTCAATTTTGCGCAGCAACAAACACAATGGATTTCCGGTGATCGACCACACGAGAAGTGGTGAAACACTTGTCATTGGGTTAGTTCTTCGGAGTCACTTGCTTGTACTCCTTCAATCTAAAGTGGATTTTCAACATAGTCCTCTGCCTTGTGATCCAAGCGCCAGACCGATCATGCACAGATTTAGCGAGTTTGCTAAACCTGTTTCATCTAAAGGGTTATGCATAGAGGATATACATCTAACTTCAGATGATTTAGAGATGTATATAGATCTTGCTCCATTTCTGAATCCGTCTCCATACGTTGTTCCTGAAGACATGTCGTTGACAAAGGTATACAACCTTTTCCGGCAACTTGGATTGAGACATCTATTTGTTGTTCCTCGTCCTTCTCGTGTGATAGGCTTGATCACAAGAAAGGATTTGCTAATTGAGGAAAACGGGGAATCATCAGCTGTTGAACTCCAACAGTCAACTAGTGTAAGAGGTCGGTACAGTGAGACAGCAACGCGGACGGACGCTGGACGTCCGCTTCTAGACGATCTCTTAGGCTAG
Protein:  
MHSNHLQNGIESDNLLWSRVPDSDDASTDGVGLLSSPRDGGGGVDSLDYEVIENYAYREEQAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAGFIVYLVINLVLVFSSAYIITQFAPAAAGSGIPPEIKGYLNGIDIPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHFNSRWPQLFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGGGGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTYYMTSWRRNYLHKKGNRVKIYEACIISCLTSAISFGLPLLRKCSPCPETVTDSGIECPRPPGMYGNYVNFYCKTDNEYNDLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLVSKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILRSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDPSARPIMHRFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSETATRTDAGRPLLDDLLG